Sequence alignment

Results: 764



#Item
691Biology / Protein methods / Protein structure / Sequence alignment / Multiple sequence alignment / Structural alignment / BLAST / T-Coffee / Sequence analysis / Bioinformatics / Science / Computational phylogenetics

A comparison of position-specific score matrices based on sequence and structure alignments ANNA R. PANCHENKO

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Source URL: www.ncbi.nlm.nih.gov

Language: English
692Biochemistry / Signal transduction / Transforming growth factor beta / GTPase / Biology / Protein domains / Protein structure

Additional file 9: Validation dataset Code Description No. of subgroup No. of Family member Representative PDB structure code No. of subsites Structural Class and Fold Sequence identity (%) RMSD Alignment length Source

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Source URL: www.ncbi.nlm.nih.gov

Language: English
693Biological databases / Protein structure / Computational phylogenetics / Protein domains / Entrez / Conserved Domain Database / BLAST / Sequence alignment / STING / Science / Bioinformatics / Biology

Tutorial section Entrez: Making use of its power

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Source URL: www.ncbi.nlm.nih.gov

Language: English - Date: 2007-01-19 10:55:18
694Protein structure / Protein domains / Computational phylogenetics / Conserved Domain Database / Entrez / BLAST / Pfam / Sequence alignment / Protein Data Bank / Science / Bioinformatics / Biological databases

The NCBI Handbook Chapter 3: Macromolecular Structure Databases

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Source URL: www.ncbi.nlm.nih.gov

Language: English
695Computational phylogenetics / Protein methods / Protein structure / Proteomics / Structural alignment / Sequence alignment / Root-mean-square deviation / STING / Protein domain / Biology / Science / Bioinformatics

SCOWLP update: 3D classification of protein-protein, -peptide, -saccharide and -nucleic acid interactions, and structure-based binding inferences across folds

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Source URL: www.ncbi.nlm.nih.gov

Language: English
696Biological databases / Computational phylogenetics / Mathematical and theoretical biology / National Institutes of Health / Sequence database / FASTA format / Sequence alignment / BLAST / FASTA / Science / Bioinformatics / Biology

SCOWLP update: 3D classification of protein-protein, -peptide, -saccharide and -nucleic acid interactions, and structure-based binding inferences across folds

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Source URL: www.ncbi.nlm.nih.gov

Language: English
697Computational phylogenetics / DNA / Bioinformatics / Molecular biology / Gene expression / BLAT / Sequence alignment / BLAST / Pseudogene / Biology / Genetics / Science

Microsoft Word - NeeviaConverter[removed]

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Source URL: www.ncbi.nlm.nih.gov

Language: English
698Bioinformatics / Sequence alignment

Supplementary Material Evolution of Protein Binding Modes in Homooligomers Judith E. Dayhoff, Benjamin A. Shoemaker, Stephen H. Bryant, and Anna R. Panchenko

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Source URL: www.ncbi.nlm.nih.gov

Language: English
699Computational phylogenetics / Computational science / Control theory / Sequence alignment / Error detection and correction / Viterbi algorithm / Dynamic programming / Decoding methods / Tandem repeat / Bioinformatics / Science / Markov models

A normalization strategy for comparing tag count data

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Source URL: www.ncbi.nlm.nih.gov

Language: English
700Animal virology / Porcine reproductive and respiratory syndrome virus / Viral nonstructural proteins / NSP2 / Nucleic acid sequence / Amino acid / Arterivirus / Sequence alignment / Nidovirales / Biology / Genetics

Genetic Diversity Analysis of Genotype 2 Porcine Reproductive and Respiratory Syndrome Viruses Emerging in Recent Years in China

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Source URL: www.ncbi.nlm.nih.gov

Language: English
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